Research workbench
AlphaFold monomer V2.0 prediction for inner membrane protein yejm (P0AD28)
Analyse AlphaFold monomer V2.0 prediction for inner membrane protein yejm (P0AD28) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P0AD28
- Type
- protein
- Length
- 586 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x4Ef77Afb5a3D9F41c95Be3227D1CC986CCb61835
- Molecule
- Inner membrane protein yejm
- UniProt
- P0AD28
- Pockets
- 7 · best druggability 0.80
Structure
1 distinct chain · 53% helix, 13% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Inner membrane protein yejm | protein | 586 | 53% helix, 13% strand | P0AD28 |
Pockets
7 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 800 | 0.80 | 0.83 | 68 | empty |
| 2 | 64 | 0.62 | 0.92 | 25 | empty |
| 3 | 198 | 0.55 | 0.79 | 22 | empty |
| 4 | 56 | 0.34 | 0.78 | 19 | empty |
| 5 | 79 | 0.34 | 0.75 | 13 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P0AD28
- Elsewhere: UniProt P0AD28 · AlphaFold DB P0AD28
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