Research workbench
AlphaFold monomer V2.0 prediction for putative arsenical pump membrane protein ydfa (P96678)
Analyse AlphaFold monomer V2.0 prediction for putative arsenical pump membrane protein… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P96678
- Type
- protein
- Length
- 435 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xB35df660264f41795De49C83276C108A4ba91ADE
- Molecule
- Putative arsenical pump membrane protein ydfa
- UniProt
- P96678
- Pockets
- 4 · best druggability 0.56
Structure
1 distinct chain · 81% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Putative arsenical pump membrane protein ydfa | protein | 435 | 81% helix, 0% strand | P96678 |
Pockets
4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 224 | 0.56 | 0.78 | 36 | empty |
| 2 | 101 | 0.46 | 0.79 | 20 | empty |
| 3 | 118 | 0.45 | 0.78 | 19 | empty |
| 4 | 59 | 0.28 | 0.73 | 14 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P96678
- Elsewhere: UniProt P96678 · AlphaFold DB P96678
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