Research workbench
AlphaFold monomer V2.0 prediction for UPF0699 transmembrane protein ydbt (P96616)
Analyse AlphaFold monomer V2.0 prediction for UPF0699 transmembrane protein ydbt… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P96616
- Type
- protein
- Length
- 493 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x2bF85003001845aBBb5157E430B59466805f04aE
- Molecule
- UPF0699 transmembrane protein ydbt
- UniProt
- P96616
- Pockets
- 8 · best druggability 0.74
Structure
1 distinct chain · 49% helix, 27% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | UPF0699 transmembrane protein ydbt | protein | 493 | 49% helix, 27% strand | P96616 |
Pockets
8 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 714 | 0.74 | 0.80 | 81 | empty |
| 2 | 283 | 0.64 | 0.81 | 32 | empty |
| 3 | 254 | 0.54 | 0.77 | 29 | empty |
| 4 | 188 | 0.51 | 0.77 | 24 | empty |
| 5 | 62 | 0.42 | 0.81 | 13 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P96616
- Elsewhere: UniProt P96616 · AlphaFold DB P96616
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