Research workbench
AlphaFold monomer V2.0 prediction for putative transport permease YCF38 (P48278)
Analyse AlphaFold monomer V2.0 prediction for putative transport permease YCF38 (P48278) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P48278
- Type
- protein
- Length
- 290 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xA5Ad7b0565B651fcEA9363Bec9dE2576C59B4DA2
- Molecule
- Putative transport permease YCF38
- UniProt
- P48278
- Pockets
- 4 · best druggability 0.58
Structure
1 distinct chain · 77% helix, 2% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Putative transport permease YCF38 | protein | 290 | 77% helix, 2% strand | P48278 |
Pockets
4 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 312 | 0.58 | 0.76 | 34 | empty |
| 2 | 134 | 0.51 | 0.79 | 18 | empty |
| 3 | 129 | 0.47 | 0.78 | 18 | empty |
| 4 | 58 | 0.46 | 0.83 | 14 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P48278
- Elsewhere: UniProt P48278 · AlphaFold DB P48278
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