Research workbench
AlphaFold monomer V2.0 prediction for putative transport protein ybjl (B4T0D1)
Analyse AlphaFold monomer V2.0 prediction for putative transport protein ybjl (B4T0D1) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B4T0D1
- Type
- protein
- Length
- 561 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x48cAFA58220078394F6FF347a5D7047Dbd6CD9CB
- Molecule
- Putative transport protein ybjl
- UniProt
- B4T0D1
- Pockets
- 7 · best druggability 0.78
Structure
1 distinct chain · 63% helix, 12% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Putative transport protein ybjl | protein | 561 | 63% helix, 12% strand | B4T0D1 |
Pockets
7 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1181 | 0.78 | 0.79 | 93 | empty |
| 2 | 134 | 0.63 | 0.86 | 24 | empty |
| 3 | 176 | 0.59 | 0.81 | 23 | empty |
| 4 | 128 | 0.49 | 0.80 | 15 | empty |
| 5 | 117 | 0.46 | 0.78 | 22 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B4T0D1
- Elsewhere: UniProt B4T0D1 · AlphaFold DB B4T0D1
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