Research workbench
AlphaFold monomer V2.0 prediction for putative transport protein ybjl (B5FPD7)
Analyse AlphaFold monomer V2.0 prediction for putative transport protein ybjl (B5FPD7) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B5FPD7
- Type
- protein
- Length
- 561 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xB35df660264f41795De49C83276C108A4ba91ADE
- Molecule
- Putative transport protein ybjl
- UniProt
- B5FPD7
- Pockets
- 6 · best druggability 0.78
Structure
1 distinct chain · 63% helix, 12% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Putative transport protein ybjl | protein | 561 | 63% helix, 12% strand | B5FPD7 |
Pockets
6 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1044 | 0.78 | 0.80 | 95 | empty |
| 2 | 128 | 0.64 | 0.88 | 25 | empty |
| 3 | 128 | 0.53 | 0.81 | 23 | empty |
| 4 | 124 | 0.52 | 0.81 | 14 | empty |
| 5 | 148 | 0.47 | 0.77 | 27 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B5FPD7
- Elsewhere: UniProt B5FPD7 · AlphaFold DB B5FPD7
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