Research workbench
AlphaFold monomer V2.0 prediction for putative transport protein ybjl (Q1RE78)
Analyse AlphaFold monomer V2.0 prediction for putative transport protein ybjl (Q1RE78) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q1RE78
- Type
- protein
- Length
- 561 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x79a905d858Ce72991FD6E7a9C6498620f42E146D
- Molecule
- Putative transport protein ybjl
- UniProt
- Q1RE78
- Pockets
- 7 · best druggability 0.78
Structure
1 distinct chain · 62% helix, 12% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Putative transport protein ybjl | protein | 561 | 62% helix, 12% strand | Q1RE78 |
Pockets
7 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1086 | 0.78 | 0.79 | 90 | empty |
| 2 | 136 | 0.64 | 0.87 | 24 | empty |
| 3 | 206 | 0.59 | 0.81 | 24 | empty |
| 4 | 132 | 0.51 | 0.80 | 18 | empty |
| 5 | 140 | 0.46 | 0.77 | 25 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q1RE78
- Elsewhere: UniProt Q1RE78 · AlphaFold DB Q1RE78
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