Research workbench
AlphaFold monomer V2.0 prediction for putative transport protein ybjl (Q0TJK1)
Analyse AlphaFold monomer V2.0 prediction for putative transport protein ybjl (Q0TJK1) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q0TJK1
- Type
- protein
- Length
- 561 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x80D2ac0F5e3268bC5C1d28BBAA07E3169BB02b79
- Molecule
- Putative transport protein ybjl
- UniProt
- Q0TJK1
- Pockets
- 9 · best druggability 0.73
Structure
1 distinct chain · 63% helix, 12% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Putative transport protein ybjl | protein | 561 | 63% helix, 12% strand | Q0TJK1 |
Pockets
9 pockets found on a 1 Å grid, 6 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 241 | 0.73 | 0.88 | 29 | empty |
| 2 | 532 | 0.67 | 0.77 | 49 | empty |
| 3 | 134 | 0.62 | 0.86 | 25 | empty |
| 4 | 255 | 0.61 | 0.80 | 42 | empty |
| 5 | 197 | 0.56 | 0.80 | 23 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q0TJK1
- Elsewhere: UniProt Q0TJK1 · AlphaFold DB Q0TJK1
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