Research workbench
AlphaFold monomer V2.0 prediction for inner membrane protein ybir (P75788)
Analyse AlphaFold monomer V2.0 prediction for inner membrane protein ybir (P75788) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P75788
- Type
- protein
- Length
- 372 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x6Ed09D80e98fE15DE51C9E7a8896AbF1f2365C3e
- Molecule
- Inner membrane protein ybir
- UniProt
- P75788
- Pockets
- 5 · best druggability 0.61
Structure
1 distinct chain · 79% helix, 1% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Inner membrane protein ybir | protein | 372 | 79% helix, 1% strand | P75788 |
Pockets
5 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 279 | 0.61 | 0.79 | 31 | empty |
| 2 | 187 | 0.53 | 0.78 | 25 | empty |
| 3 | 184 | 0.50 | 0.76 | 22 | empty |
| 4 | 77 | 0.44 | 0.80 | 15 | empty |
| 5 | 84 | 0.40 | 0.77 | 22 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P75788
- Elsewhere: UniProt P75788 · AlphaFold DB P75788
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