Research workbench
AlphaFold monomer V2.0 prediction for inner membrane transport protein ybat (P77400)
Analyse AlphaFold monomer V2.0 prediction for inner membrane transport protein ybat… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P77400
- Type
- protein
- Length
- 430 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x7640E563ce46561eA6F738243d99F056d01A66f1
- Molecule
- Inner membrane transport protein ybat
- UniProt
- P77400
- Pockets
- 6 · best druggability 0.73
Structure
1 distinct chain · 80% helix, 2% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Inner membrane transport protein ybat | protein | 430 | 80% helix, 2% strand | P77400 |
Pockets
6 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 546 | 0.73 | 0.81 | 60 | empty |
| 2 | 128 | 0.54 | 0.81 | 17 | empty |
| 3 | 50 | 0.36 | 0.80 | 16 | empty |
| 4 | 85 | 0.35 | 0.74 | 15 | empty |
| 5 | 68 | 0.30 | 0.74 | 12 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P77400
- Elsewhere: UniProt P77400 · AlphaFold DB P77400
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