Research workbench

AlphaFold monomer V2.0 prediction for uncharacterized protein C16C9.05 (Q09819)

Analyse AlphaFold monomer V2.0 prediction for uncharacterized protein C16C9.05 (Q09819) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

Accession: Q09819
Type: protein
Length: 404 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0xCACEF60BdA4Ce8E2d7423EAb841647271C1514e8
Molecule: Uncharacterized protein C16C9.05
UniProt: Q09819
Pockets: 7 · best druggability 0.48

Structure

1 distinct chain · 18% helix, 8% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Uncharacterized protein C16C9.05	protein	404	18% helix, 8% strand	Q09819

Pockets

7 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	237	0.48	0.74	38	empty
2	176	0.46	0.75	21	empty
3	153	0.39	0.72	15	empty
4	87	0.36	0.75	19	empty
5	59	0.33	0.76	14	empty

Compared structures

8I02 · Cryo-EM structure of the SIN3S complex from S. pombe · an experimental structure of the same protein · chain A against F, TM-score 0.32
8IFG · Cryo-EM structure of the Clr6S (Clr6-HDAC) complex from S. pombe · an experimental structure of the same protein · chain A against F, TM-score 0.10

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q09819
Elsewhere: UniProt Q09819 · AlphaFold DB Q09819

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