Research workbench
AlphaFold monomer V2.0 prediction for probable tonb-dependent receptor NMB0964 (Q9JZN9)
Analyse AlphaFold monomer V2.0 prediction for probable tonb-dependent receptor NMB0964… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9JZN9
- Type
- protein
- Length
- 758 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x7A4835E1d5C827cCdBb787F0BA47F7B72797C5bb
- Molecule
- Probable tonb-dependent receptor NMB0964
- UniProt
- Q9JZN9
- Pockets
- 7 · best druggability 0.87
Structure
1 distinct chain · 7% helix, 52% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Probable tonb-dependent receptor NMB0964 | protein | 758 | 7% helix, 52% strand | Q9JZN9 |
Pockets
7 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 722 | 0.87 | 0.90 | 95 | empty |
| 2 | 993 | 0.86 | 0.87 | 115 | empty |
| 3 | 521 | 0.71 | 0.80 | 58 | empty |
| 4 | 108 | 0.39 | 0.76 | 22 | empty |
| 5 | 55 | 0.38 | 0.80 | 16 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Compared structures
- 4RDR · Structure of the bacterial zn-transporter znud from neisseria meningitidis (locked… · an experimental structure of the same protein · chain A against A, TM-score 0.91
- 4RDR · Structure of the bacterial Zn-transporter ZnuD from Neisseria meningitidis (locked… · an experimental structure of the same protein · chain A against A, TM-score 0.91
- 4RDT · Structure of the bacterial zn-transporter znud from neisseria meningitidis (flexible… · an experimental structure of the same protein · chain A against A, TM-score 0.82
- 4RDT · Structure of the bacterial Zn-transporter ZnuD from Neisseria meningitidis (flexible… · an experimental structure of the same protein · chain A against A, TM-score 0.82
- 4RVW · Structure of the bacterial zn-transporter znud from neisseria meningitidis (soaked with… · an experimental structure of the same protein · chain A against A, TM-score 0.79
- 4RVW · Structure of the bacterial Zn-transporter ZnuD from Neisseria meningitidis (soaked with… · an experimental structure of the same protein · chain A against A, TM-score 0.79
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9JZN9
- Elsewhere: UniProt Q9JZN9 · AlphaFold DB Q9JZN9
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