Research workbench
AlphaFold monomer V2.0 prediction for sphingomyelinase DDB_G0288017 (Q1ZXD9)
Analyse AlphaFold monomer V2.0 prediction for sphingomyelinase DDB_G0288017 (Q1ZXD9) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q1ZXD9
- Type
- protein
- Length
- 458 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xb4D2d9c96b0D792d0b77e7147D724cc1F801ae58
- Molecule
- Sphingomyelinase DDB_G0288017
- UniProt
- Q1ZXD9
- Pockets
- 6 · best druggability 0.71
Structure
1 distinct chain · 19% helix, 26% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Sphingomyelinase DDB_G0288017 | protein | 458 | 19% helix, 26% strand | Q1ZXD9 |
Pockets
6 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 433 | 0.71 | 0.81 | 45 | empty |
| 2 | 244 | 0.51 | 0.75 | 24 | empty |
| 3 | 171 | 0.44 | 0.74 | 17 | empty |
| 4 | 72 | 0.34 | 0.76 | 18 | empty |
| 5 | 57 | 0.32 | 0.76 | 13 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q1ZXD9
- Elsewhere: UniProt Q1ZXD9 · AlphaFold DB Q1ZXD9
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