Research workbench
AlphaFold monomer V2.0 prediction for putative hth-type transcriptional regulatory protein APE_0778 (Q9YDZ1)
Analyse AlphaFold monomer V2.0 prediction for putative hth-type transcriptional… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9YDZ1
- Type
- protein
- Length
- 329 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x71112d4fF7ebb3b617963c05f052289e073082FD
- Molecule
- Putative hth-type transcriptional regulatory protein APE_0778
- UniProt
- Q9YDZ1
- Pockets
- 4 · best druggability 0.45
Structure
1 distinct chain · 40% helix, 22% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Putative hth-type transcriptional regulatory protein APE_0778 | protein | 329 | 40% helix, 22% strand | Q9YDZ1 |
Pockets
4 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 108 | 0.45 | 0.79 | 25 | empty |
| 2 | 91 | 0.34 | 0.74 | 21 | empty |
| 3 | 50 | 0.32 | 0.77 | 9 | empty |
| 4 | 86 | 0.31 | 0.73 | 24 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9YDZ1
- Elsewhere: UniProt Q9YDZ1 · AlphaFold DB Q9YDZ1
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