Research workbench
AlphaFold monomer V2.0 prediction for degv domain-containing protein MW0711 (Q8NXM4)
Analyse AlphaFold monomer V2.0 prediction for degv domain-containing protein MW0711… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q8NXM4
- Type
- protein
- Length
- 288 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x3298b100681D3A2372Bba3b2f282750dD71629B9
- Molecule
- Degv domain-containing protein MW0711
- UniProt
- Q8NXM4
- Pockets
- 3 · best druggability 0.75
Structure
1 distinct chain · 43% helix, 25% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Degv domain-containing protein MW0711 | protein | 288 | 43% helix, 25% strand | Q8NXM4 |
Pockets
3 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 90 | 0.75 | 0.97 | 29 | empty |
| 2 | 186 | 0.51 | 0.77 | 31 | empty |
| 3 | 59 | 0.32 | 0.76 | 18 | empty |
Compared structures
- 7SCL · The X-ray crystal structure of Staphylococcus aureus Fatty Acid Kinase B1 (FakB1) mutant… · an experimental structure of the same protein · chain A against A, TM-score 0.99
- 7SCL · The X-ray crystal structure of staphylococcus aureus fatty acid kinase B1 (FAKB1) mutant… · an experimental structure of the same protein · chain A against A, TM-score 0.99
- 7SG3 · The X-ray crystal structure of the Staphylococcus aureus Fatty Acid Kinase B1 mutant… · an experimental structure of the same protein · chain A against A, TM-score 0.94
- 7SG3 · The X-ray crystal structure of the staphylococcus aureus fatty acid kinase B1 mutant… · an experimental structure of the same protein · chain A against A, TM-score 0.94
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8NXM4
- Elsewhere: UniProt Q8NXM4 · AlphaFold DB Q8NXM4
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