Research workbench
AlphaFold monomer V2.0 prediction for G8 domain-containing protein DDB_G0286311 (Q54LY1)
Analyse AlphaFold monomer V2.0 prediction for G8 domain-containing protein DDB_G0286311… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q54LY1
- Type
- protein
- Length
- 1,473 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x29d49a7361954F998e834274B160AAE7B6751739
- Molecule
- G8 domain-containing protein DDB_G0286311
- UniProt
- Q54LY1
- Pockets
- 15 · best druggability 0.67
Structure
1 distinct chain · 8% helix, 39% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | G8 domain-containing protein DDB_G0286311 | protein | 1473 | 8% helix, 39% strand | Q54LY1 |
Pockets
15 pockets found on a 1 Å grid, 6 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 59 | 0.67 | 0.95 | 18 | empty |
| 2 | 594 | 0.65 | 0.75 | 45 | empty |
| 3 | 496 | 0.62 | 0.75 | 44 | empty |
| 4 | 404 | 0.62 | 0.77 | 38 | empty |
| 5 | 235 | 0.59 | 0.80 | 31 | empty |
Modifications
Observed in the structure: 6 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q54LY1
- Elsewhere: UniProt Q54LY1 · AlphaFold DB Q54LY1
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