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AlphaFold monomer V2.0 prediction for bromodomain and wd repeat- containing DDB_G0285837 (Q54MP8)
Analyse AlphaFold monomer V2.0 prediction for bromodomain and wd repeat- containing… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q54MP8
- Type
- protein
- Length
- 2,200 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xEE5Bd76Be7ceC1DC7D11a28D7e5f5B5963458B08
- Molecule
- Bromodomain and wd repeat-containing DDB_G0285837
- UniProt
- Q54MP8
- Pockets
- 17 · best druggability 0.77
Structure
1 distinct chain · 10% helix, 12% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Bromodomain and wd repeat-containing DDB_G0285837 | protein | 2200 | 10% helix, 12% strand | Q54MP8 |
Pockets
17 pockets found on a 1 Å grid, 10 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 929 | 0.77 | 0.79 | 76 | empty |
| 2 | 860 | 0.71 | 0.76 | 73 | empty |
| 3 | 660 | 0.69 | 0.77 | 55 | empty |
| 4 | 504 | 0.65 | 0.77 | 41 | empty |
| 5 | 307 | 0.61 | 0.78 | 34 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q54MP8
- Elsewhere: UniProt Q54MP8 · AlphaFold DB Q54MP8
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