Research workbench
AlphaFold monomer V2.0 prediction for B3 domain-containing protein AT5G25475 (Q680D9)
Analyse AlphaFold monomer V2.0 prediction for B3 domain-containing protein AT5G25475… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q680D9
- Type
- protein
- Length
- 282 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x53b28510180402947A4334bb5E9B806FD2b6c2C0
- Molecule
- B3 domain-containing protein AT5G25475
- UniProt
- Q680D9
- Pockets
- 4 · best druggability 0.64
Structure
1 distinct chain · 17% helix, 30% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | B3 domain-containing protein AT5G25475 | protein | 282 | 17% helix, 30% strand | Q680D9 |
Pockets
4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 419 | 0.64 | 0.78 | 48 | empty |
| 2 | 75 | 0.32 | 0.74 | 17 | empty |
| 3 | 57 | 0.28 | 0.74 | 20 | empty |
| 4 | 52 | 0.28 | 0.75 | 15 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q680D9
- Elsewhere: UniProt Q680D9 · AlphaFold DB Q680D9
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