Research workbench
AlphaFold monomer V2.0 prediction for probable amino-acid ABC transporter periplasmic-binding protein Y4TE (P55659)
Analyse AlphaFold monomer V2.0 prediction for probable amino-acid ABC transporter… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P55659
- Type
- protein
- Length
- 300 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xbDA05C32aD6eE153C8C5A78dfa48d7Ba25694fea
- Molecule
- Probable amino-acid ABC transporter periplasmic-binding protein Y4TE
- UniProt
- P55659
- Pockets
- 3 · best druggability 0.77
Structure
1 distinct chain · 34% helix, 20% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Probable amino-acid ABC transporter periplasmic-binding protein Y4TE | protein | 300 | 34% helix, 20% strand | P55659 |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 98 | 0.77 | 0.97 | 29 | empty |
| 2 | 152 | 0.49 | 0.78 | 20 | empty |
| 3 | 53 | 0.32 | 0.77 | 16 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P55659
- Elsewhere: UniProt P55659 · AlphaFold DB P55659
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