Research workbench
AlphaFold monomer V2.0 prediction for putative transposase Y4RJ (P55643)
Analyse AlphaFold monomer V2.0 prediction for putative transposase Y4RJ (P55643) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P55643
- Type
- protein
- Length
- 396 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x1381Cac6F3bEE35084bF6DE8212864ba90Ff872a
- Molecule
- Putative transposase Y4RJ
- UniProt
- P55643
- Pockets
- 4 · best druggability 0.44
Structure
1 distinct chain · 50% helix, 12% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Putative transposase Y4RJ | protein | 396 | 50% helix, 12% strand | P55643 |
Pockets
4 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 199 | 0.44 | 0.73 | 23 | empty |
| 2 | 120 | 0.43 | 0.77 | 28 | empty |
| 3 | 75 | 0.34 | 0.75 | 12 | empty |
| 4 | 100 | 0.33 | 0.73 | 18 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P55643
- Elsewhere: UniProt P55643 · AlphaFold DB P55643
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