Research workbench
AlphaFold monomer V2.0 prediction for uncharacterized hth-type transcriptional regulator Y4MQ (P55576)
Analyse AlphaFold monomer V2.0 prediction for uncharacterized hth-type transcriptional… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P55576
- Type
- protein
- Length
- 298 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x6509EA76d64b01d8DDeB0eF8F412d4B4B3B7061c
- Molecule
- Uncharacterized hth-type transcriptional regulator Y4MQ
- UniProt
- P55576
- Pockets
- 4 · best druggability 0.60
Structure
1 distinct chain · 43% helix, 20% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Uncharacterized hth-type transcriptional regulator Y4MQ | protein | 298 | 43% helix, 20% strand | P55576 |
Pockets
4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 85 | 0.60 | 0.89 | 27 | empty |
| 2 | 144 | 0.46 | 0.77 | 28 | empty |
| 3 | 61 | 0.27 | 0.73 | 17 | empty |
| 4 | 51 | 0.26 | 0.74 | 15 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P55576
- Elsewhere: UniProt P55576 · AlphaFold DB P55576
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