Research workbench
AlphaFold monomer V2.0 prediction for exopolysaccharide phosphotransferase NFA_48680 (Q5YQ21)
Analyse AlphaFold monomer V2.0 prediction for exopolysaccharide phosphotransferase… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q5YQ21
- Type
- protein
- Length
- 506 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x6Ed09D80e98fE15DE51C9E7a8896AbF1f2365C3e
- Molecule
- Exopolysaccharide phosphotransferase NFA_48680
- UniProt
- Q5YQ21
- Pockets
- 4 · best druggability 0.80
Structure
1 distinct chain · 32% helix, 21% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Exopolysaccharide phosphotransferase NFA_48680 | protein | 506 | 32% helix, 21% strand | Q5YQ21 |
Pockets
4 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 561 | 0.80 | 0.86 | 65 | empty |
| 2 | 199 | 0.57 | 0.80 | 27 | empty |
| 3 | 151 | 0.50 | 0.78 | 31 | empty |
| 4 | 55 | 0.38 | 0.80 | 13 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5YQ21
- Elsewhere: UniProt Q5YQ21 · AlphaFold DB Q5YQ21
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