Research workbench
AlphaFold monomer V2.0 prediction for UPF0502 protein AVIN_04790 (C1DJE8)
Analyse AlphaFold monomer V2.0 prediction for UPF0502 protein AVIN_04790 (C1DJE8) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- C1DJE8
- Type
- protein
- Length
- 223 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xBeB220F0B5b0C48F46B5DDd3E3b071BC0827f8D6
- Molecule
- UPF0502 protein AVIN_04790
- UniProt
- C1DJE8
- Pockets
- 2 · best druggability 0.54
Structure
1 distinct chain · 57% helix, 10% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | UPF0502 protein AVIN_04790 | protein | 223 | 57% helix, 10% strand | C1DJE8 |
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 71 | 0.54 | 0.87 | 24 | empty |
| 2 | 54 | 0.34 | 0.78 | 12 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt C1DJE8
- Elsewhere: UniProt C1DJE8 · AlphaFold DB C1DJE8
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