Research workbench
AlphaFold monomer V2.0 prediction for putative transport protein YPO4083/Y4100/YP_3992 (Q8Z9V7)
Analyse AlphaFold monomer V2.0 prediction for putative transport protein… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q8Z9V7
- Type
- protein
- Length
- 552 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xDE2799055eD4c588222eDb2258e35ff086b5A24d
- Molecule
- Putative transport protein YPO4083/Y4100/YP_3992
- UniProt
- Q8Z9V7
- Pockets
- 6 · best druggability 0.66
Structure
1 distinct chain · 63% helix, 12% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Putative transport protein YPO4083/Y4100/YP_3992 | protein | 552 | 63% helix, 12% strand | Q8Z9V7 |
Pockets
6 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 588 | 0.66 | 0.76 | 75 | empty |
| 2 | 145 | 0.64 | 0.86 | 24 | empty |
| 3 | 311 | 0.54 | 0.75 | 31 | empty |
| 4 | 177 | 0.49 | 0.77 | 28 | empty |
| 5 | 58 | 0.30 | 0.74 | 13 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8Z9V7
- Elsewhere: UniProt Q8Z9V7 · AlphaFold DB Q8Z9V7
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