Research workbench
AlphaFold monomer V2.0 prediction for putative zinc metalloprotease PA3649 (Q9HXY3)
Analyse AlphaFold monomer V2.0 prediction for putative zinc metalloprotease PA3649… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9HXY3
- Type
- protein
- Length
- 450 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xd1A2963012bEcbC7A8f505464439Ab678C48936f
- Molecule
- Putative zinc metalloprotease PA3649
- UniProt
- Q9HXY3
- Pockets
- 3 · best druggability 0.77
Structure
1 distinct chain · 46% helix, 23% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Putative zinc metalloprotease PA3649 | protein | 450 | 46% helix, 23% strand | Q9HXY3 |
Pockets
3 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1130 | 0.77 | 0.79 | 87 | empty |
| 2 | 241 | 0.57 | 0.78 | 29 | empty |
| 3 | 166 | 0.45 | 0.75 | 26 | empty |
Compared structures
- 7XFS · MucP PDZ1 domain · an experimental structure of the same protein · chain A against A, TM-score 0.21
- 7XFU · MucP PDZ2 domain with peptide GPAVLA · an experimental structure of the same protein · chain A against B, TM-score 0.19
- 7XFT · MucP PDZ2 domain · an experimental structure of the same protein · chain A against A, TM-score 0.19
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9HXY3
- Elsewhere: UniProt Q9HXY3 · AlphaFold DB Q9HXY3
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