Research workbench
AlphaFold monomer V2.0 prediction for putative ABC transporter peptide-binding protein BAB2_0812 (Q2YK66)
Analyse AlphaFold monomer V2.0 prediction for putative ABC transporter peptide-binding… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q2YK66
- Type
- protein
- Length
- 527 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x44aFAEAfE0F18812221E4762a1fA969072479765
- Molecule
- Putative ABC transporter peptide-binding protein BAB2_0812
- UniProt
- Q2YK66
- Pockets
- 5 · best druggability 0.81
Structure
1 distinct chain · 32% helix, 22% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Putative ABC transporter peptide-binding protein BAB2_0812 | protein | 527 | 32% helix, 22% strand | Q2YK66 |
Pockets
5 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1124 | 0.81 | 0.82 | 89 | empty |
| 2 | 67 | 0.53 | 0.86 | 17 | empty |
| 3 | 198 | 0.46 | 0.74 | 31 | empty |
| 4 | 79 | 0.40 | 0.78 | 18 | empty |
| 5 | 60 | 0.37 | 0.79 | 17 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q2YK66
- Elsewhere: UniProt Q2YK66 · AlphaFold DB Q2YK66
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