Research workbench
AlphaFold monomer V2.0 prediction for putative transport protein YPK_2734 (B1JRK3)
Analyse AlphaFold monomer V2.0 prediction for putative transport protein YPK_2734… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B1JRK3
- Type
- protein
- Length
- 562 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xeed72B55F0dD4B7707c70e598051F9ab5d1Eb12c
- Molecule
- Putative transport protein YPK_2734
- UniProt
- B1JRK3
- Pockets
- 6 · best druggability 0.77
Structure
1 distinct chain · 63% helix, 12% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Putative transport protein YPK_2734 | protein | 562 | 63% helix, 12% strand | B1JRK3 |
Pockets
6 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1173 | 0.77 | 0.79 | 84 | empty |
| 2 | 131 | 0.71 | 0.91 | 19 | empty |
| 3 | 140 | 0.53 | 0.80 | 23 | empty |
| 4 | 116 | 0.48 | 0.79 | 14 | empty |
| 5 | 120 | 0.47 | 0.79 | 25 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B1JRK3
- Elsewhere: UniProt B1JRK3 · AlphaFold DB B1JRK3
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