Research workbench
AlphaFold monomer V2.0 prediction for transmembrane protein DDB_G0272716 (Q86IJ0)
Analyse AlphaFold monomer V2.0 prediction for transmembrane protein DDB_G0272716… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q86IJ0
- Type
- protein
- Length
- 351 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xBD7ffd264B77f87Ec7a7E1d74C067EAf75f1C4fB
- Molecule
- Transmembrane protein DDB_G0272716
- UniProt
- Q86IJ0
- Pockets
- 8 · best druggability 0.66
Structure
1 distinct chain · 83% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Transmembrane protein DDB_G0272716 | protein | 351 | 83% helix, 0% strand | Q86IJ0 |
Pockets
8 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 264 | 0.66 | 0.82 | 32 | empty |
| 2 | 179 | 0.52 | 0.78 | 26 | empty |
| 3 | 69 | 0.51 | 0.85 | 13 | empty |
| 4 | 74 | 0.46 | 0.82 | 18 | empty |
| 5 | 140 | 0.43 | 0.75 | 24 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q86IJ0
- Elsewhere: UniProt Q86IJ0 · AlphaFold DB Q86IJ0
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