Research workbench
AlphaFold monomer V2.0 prediction for set and mynd domain-containing protein DDB_G0292454 (Q54D67)
Analyse AlphaFold monomer V2.0 prediction for set and mynd domain-containing protein… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q54D67
- Type
- protein
- Length
- 343 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x84e61bE2B32b5580a50fE9Dd16c41b59E17F5FB5
- Molecule
- Set and mynd domain-containing protein DDB_G0292454
- UniProt
- Q54D67
- Pockets
- 6 · best druggability 0.66
Structure
1 distinct chain · 40% helix, 15% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Set and mynd domain-containing protein DDB_G0292454 | protein | 343 | 40% helix, 15% strand | Q54D67 |
Pockets
6 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 291 | 0.66 | 0.82 | 42 | empty |
| 2 | 180 | 0.51 | 0.77 | 35 | empty |
| 3 | 204 | 0.50 | 0.76 | 21 | empty |
| 4 | 123 | 0.46 | 0.78 | 24 | empty |
| 5 | 85 | 0.40 | 0.78 | 19 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q54D67
- Elsewhere: UniProt Q54D67 · AlphaFold DB Q54D67
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.