Research workbench
AlphaFold monomer V2.0 prediction for UPF0597 protein PPA0217 (Q6AB88)
Analyse AlphaFold monomer V2.0 prediction for UPF0597 protein PPA0217 (Q6AB88) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q6AB88
- Type
- protein
- Length
- 354 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x7f22db67e325Ff43E92f7FAEAE26CD49C39a08F8
- Molecule
- UPF0597 protein PPA0217
- UniProt
- Q6AB88
- Pockets
- 5 · best druggability 0.67
Structure
1 distinct chain · 55% helix, 9% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | UPF0597 protein PPA0217 | protein | 354 | 55% helix, 9% strand | Q6AB88 |
Pockets
5 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 503 | 0.67 | 0.78 | 54 | empty |
| 2 | 155 | 0.49 | 0.78 | 28 | empty |
| 3 | 84 | 0.36 | 0.75 | 19 | empty |
| 4 | 111 | 0.34 | 0.73 | 19 | empty |
| 5 | 72 | 0.28 | 0.72 | 18 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q6AB88
- Elsewhere: UniProt Q6AB88 · AlphaFold DB Q6AB88
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