Research workbench
AlphaFold monomer V2.0 prediction for carbamoyl-phosphate synthase large chain (A5D508)
Analyse AlphaFold monomer V2.0 prediction for carbamoyl-phosphate synthase large chain… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A5D508
- Type
- protein
- Length
- 1,083 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xd8D116132E2695FBadcaD540BCAfA7138E178701
- Molecule
- Carbamoyl-phosphate synthase large chain
- UniProt
- A5D508
- Pockets
- 12 · best druggability 0.82
Structure
1 distinct chain · 38% helix, 20% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Carbamoyl-phosphate synthase large chain | protein | 1083 | 38% helix, 20% strand | A5D508 |
Pockets
12 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 301 | 0.82 | 0.93 | 49 | empty |
| 2 | 1030 | 0.82 | 0.83 | 112 | empty |
| 3 | 427 | 0.80 | 0.88 | 39 | empty |
| 4 | 445 | 0.76 | 0.85 | 69 | empty |
| 5 | 138 | 0.48 | 0.78 | 26 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A5D508
- Elsewhere: UniProt A5D508 · AlphaFold DB A5D508
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