Research workbench
AlphaFold monomer V2.0 prediction for carbamoyl-phosphate synthase large chain (Q1D6Y8)
Analyse AlphaFold monomer V2.0 prediction for carbamoyl-phosphate synthase large chain… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q1D6Y8
- Type
- protein
- Length
- 1,083 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x738c1929c69B751bD0Be0B962D9bac20B631aAc6
- Molecule
- Carbamoyl-phosphate synthase large chain
- UniProt
- Q1D6Y8
- Pockets
- 10 · best druggability 0.85
Structure
1 distinct chain · 38% helix, 20% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Carbamoyl-phosphate synthase large chain | protein | 1083 | 38% helix, 20% strand | Q1D6Y8 |
Pockets
10 pockets found on a 1 Å grid, 5 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1055 | 0.85 | 0.86 | 109 | empty |
| 2 | 241 | 0.84 | 0.96 | 45 | empty |
| 3 | 670 | 0.76 | 0.81 | 63 | empty |
| 4 | 718 | 0.75 | 0.80 | 72 | empty |
| 5 | 452 | 0.59 | 0.74 | 53 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q1D6Y8
- Elsewhere: UniProt Q1D6Y8 · AlphaFold DB Q1D6Y8
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