Research workbench
AlphaFold monomer V2.0 prediction for uncharacterized protein APE_2078 (Q9YA60)
Analyse AlphaFold monomer V2.0 prediction for uncharacterized protein APE_2078 (Q9YA60) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9YA60
- Type
- protein
- Length
- 437 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x5881B09f2D8e743400698633641fc1cD2Ed2BE6F
- Molecule
- Uncharacterized protein APE_2078
- UniProt
- Q9YA60
- Pockets
- 4 · best druggability 0.79
Structure
1 distinct chain · 29% helix, 31% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Uncharacterized protein APE_2078 | protein | 437 | 29% helix, 31% strand | Q9YA60 |
Pockets
4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 542 | 0.79 | 0.86 | 51 | empty |
| 2 | 52 | 0.34 | 0.79 | 18 | empty |
| 3 | 60 | 0.31 | 0.75 | 18 | empty |
| 4 | 61 | 0.29 | 0.75 | 13 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9YA60
- Elsewhere: UniProt Q9YA60 · AlphaFold DB Q9YA60
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