Research workbench
AlphaFold monomer V2.0 prediction for putative cysteine protease yopt-like BLR2058 (Q9AMW4)
Analyse AlphaFold monomer V2.0 prediction for putative cysteine protease yopt-like… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9AMW4
- Type
- protein
- Length
- 298 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x025f3b1a898b05AD2731bE6Ab72687b5920c4A3F
- Molecule
- Putative cysteine protease yopt-like BLR2058
- UniProt
- Q9AMW4
- Pockets
- 3 · best druggability 0.54
Structure
1 distinct chain · 33% helix, 17% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Putative cysteine protease yopt-like BLR2058 | protein | 298 | 33% helix, 17% strand | Q9AMW4 |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 266 | 0.54 | 0.76 | 34 | empty |
| 2 | 185 | 0.45 | 0.74 | 29 | empty |
| 3 | 97 | 0.43 | 0.78 | 15 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9AMW4
- Elsewhere: UniProt Q9AMW4 · AlphaFold DB Q9AMW4
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