Research workbench
AlphaFold monomer V2.0 prediction for wd repeat-containing protein DDB_G0292056 (Q54DS4)
Analyse AlphaFold monomer V2.0 prediction for wd repeat-containing protein DDB_G0292056… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q54DS4
- Type
- protein
- Length
- 1,823 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x3cA0EE6820f947118590759a11eAFe76581DaA01
- Molecule
- Wd repeat-containing protein DDB_G0292056
- UniProt
- Q54DS4
- Pockets
- 10 · best druggability 0.75
Structure
1 distinct chain · 14% helix, 11% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Wd repeat-containing protein DDB_G0292056 | protein | 1823 | 14% helix, 11% strand | Q54DS4 |
Pockets
10 pockets found on a 1 Å grid, 5 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 627 | 0.75 | 0.81 | 61 | empty |
| 2 | 554 | 0.63 | 0.75 | 51 | empty |
| 3 | 328 | 0.61 | 0.78 | 34 | empty |
| 4 | 383 | 0.57 | 0.74 | 36 | empty |
| 5 | 251 | 0.53 | 0.76 | 28 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q54DS4
- Elsewhere: UniProt Q54DS4 · AlphaFold DB Q54DS4
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