Research workbench
AlphaFold monomer V2.0 prediction for UPF0502 protein ETA_20480 (B2VDJ2)
Analyse AlphaFold monomer V2.0 prediction for UPF0502 protein ETA_20480 (B2VDJ2) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B2VDJ2
- Type
- protein
- Length
- 217 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x8f8EdB0f2CB8B755CA644841812fd6844544e924
- Molecule
- UPF0502 protein ETA_20480
- UniProt
- B2VDJ2
- Pockets
- 4 · best druggability 0.36
Structure
1 distinct chain · 51% helix, 9% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | UPF0502 protein ETA_20480 | protein | 217 | 51% helix, 9% strand | B2VDJ2 |
Pockets
4 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 109 | 0.36 | 0.74 | 22 | empty |
| 2 | 70 | 0.36 | 0.77 | 13 | empty |
| 3 | 70 | 0.35 | 0.76 | 16 | empty |
| 4 | 58 | 0.32 | 0.76 | 13 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B2VDJ2
- Elsewhere: UniProt B2VDJ2 · AlphaFold DB B2VDJ2
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