Research workbench
AlphaFold monomer V2.0 prediction for carbamoyl-phosphate synthase large chain (B2GD06)
Analyse AlphaFold monomer V2.0 prediction for carbamoyl-phosphate synthase large chain… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B2GD06
- Type
- protein
- Length
- 1,059 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x979789353e6255fD1B9686ec8eB84C4662C56FCd
- Molecule
- Carbamoyl-phosphate synthase large chain
- UniProt
- B2GD06
- Pockets
- 9 · best druggability 0.83
Structure
1 distinct chain · 38% helix, 21% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Carbamoyl-phosphate synthase large chain | protein | 1059 | 38% helix, 21% strand | B2GD06 |
Pockets
9 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 295 | 0.83 | 0.94 | 47 | empty |
| 2 | 1024 | 0.83 | 0.84 | 121 | empty |
| 3 | 1109 | 0.74 | 0.77 | 93 | empty |
| 4 | 461 | 0.72 | 0.81 | 43 | empty |
| 5 | 140 | 0.42 | 0.75 | 23 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B2GD06
- Elsewhere: UniProt B2GD06 · AlphaFold DB B2GD06
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