Research workbench
AlphaFold monomer V2.0 prediction for UPF0313 protein VP1980 (Q87N95)
Analyse AlphaFold monomer V2.0 prediction for UPF0313 protein VP1980 (Q87N95) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q87N95
- Type
- protein
- Length
- 777 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xb4D2d9c96b0D792d0b77e7147D724cc1F801ae58
- Molecule
- UPF0313 protein VP1980
- UniProt
- Q87N95
- Pockets
- 10 · best druggability 0.79
Structure
1 distinct chain · 31% helix, 12% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | UPF0313 protein VP1980 | protein | 777 | 31% helix, 12% strand | Q87N95 |
Pockets
10 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1160 | 0.79 | 0.81 | 89 | empty |
| 2 | 70 | 0.74 | 0.98 | 26 | empty |
| 3 | 493 | 0.64 | 0.76 | 53 | empty |
| 4 | 54 | 0.49 | 0.86 | 17 | empty |
| 5 | 112 | 0.46 | 0.79 | 22 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q87N95
- Elsewhere: UniProt Q87N95 · AlphaFold DB Q87N95
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