Research workbench
AlphaFold monomer V2.0 prediction for carbamoyl-phosphate synthase large chain (B8D1H3)
Analyse AlphaFold monomer V2.0 prediction for carbamoyl-phosphate synthase large chain… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B8D1H3
- Type
- protein
- Length
- 1,067 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xb9791857C9582e6dd746C06c66b913e613E9426D
- Molecule
- Carbamoyl-phosphate synthase large chain
- UniProt
- B8D1H3
- Pockets
- 8 · best druggability 0.87
Structure
1 distinct chain · 38% helix, 21% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Carbamoyl-phosphate synthase large chain | protein | 1067 | 38% helix, 21% strand | B8D1H3 |
Pockets
8 pockets found on a 1 Å grid, 6 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1116 | 0.87 | 0.88 | 120 | empty |
| 2 | 273 | 0.82 | 0.93 | 48 | empty |
| 3 | 584 | 0.76 | 0.83 | 61 | empty |
| 4 | 565 | 0.73 | 0.81 | 73 | empty |
| 5 | 193 | 0.68 | 0.86 | 20 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B8D1H3
- Elsewhere: UniProt B8D1H3 · AlphaFold DB B8D1H3
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