Research workbench
AlphaFold monomer V2.0 prediction for carbamoyl-phosphate synthase large chain (B1YIR9)
Analyse AlphaFold monomer V2.0 prediction for carbamoyl-phosphate synthase large chain… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B1YIR9
- Type
- protein
- Length
- 1,070 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x97b5432DC1040FDDCe72dc1468B30fbE934c6dc4
- Molecule
- Carbamoyl-phosphate synthase large chain
- UniProt
- B1YIR9
- Pockets
- 9 · best druggability 0.83
Structure
1 distinct chain · 39% helix, 21% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Carbamoyl-phosphate synthase large chain | protein | 1070 | 39% helix, 21% strand | B1YIR9 |
Pockets
9 pockets found on a 1 Å grid, 5 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1093 | 0.83 | 0.84 | 107 | empty |
| 2 | 244 | 0.83 | 0.95 | 43 | empty |
| 3 | 761 | 0.73 | 0.78 | 50 | empty |
| 4 | 530 | 0.68 | 0.78 | 66 | empty |
| 5 | 163 | 0.54 | 0.80 | 30 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B1YIR9
- Elsewhere: UniProt B1YIR9 · AlphaFold DB B1YIR9
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