Research workbench
AlphaFold monomer V2.0 prediction for UPF0283 membrane protein YPK_1899 (B1JJS9)
Analyse AlphaFold monomer V2.0 prediction for UPF0283 membrane protein YPK_1899 (B1JJS9) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B1JJS9
- Type
- protein
- Length
- 353 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x5e58272ea25a05e06901A2eAe9f63939b344e0c6
- Molecule
- UPF0283 membrane protein YPK_1899
- UniProt
- B1JJS9
- Pockets
- 5 · best druggability 0.54
Structure
1 distinct chain · 70% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | UPF0283 membrane protein YPK_1899 | protein | 353 | 70% helix, 0% strand | B1JJS9 |
Pockets
5 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 56 | 0.54 | 0.87 | 14 | empty |
| 2 | 101 | 0.44 | 0.78 | 21 | empty |
| 3 | 148 | 0.42 | 0.74 | 26 | empty |
| 4 | 105 | 0.42 | 0.77 | 19 | empty |
| 5 | 57 | 0.33 | 0.77 | 15 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B1JJS9
- Elsewhere: UniProt B1JJS9 · AlphaFold DB B1JJS9
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