Research workbench
AlphaFold monomer V2.0 prediction for UPF0283 membrane protein YPN_1807 (Q1CIP4)
Analyse AlphaFold monomer V2.0 prediction for UPF0283 membrane protein YPN_1807 (Q1CIP4) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q1CIP4
- Type
- protein
- Length
- 353 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xBeB220F0B5b0C48F46B5DDd3E3b071BC0827f8D6
- Molecule
- UPF0283 membrane protein YPN_1807
- UniProt
- Q1CIP4
- Pockets
- 5 · best druggability 0.74
Structure
1 distinct chain · 69% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | UPF0283 membrane protein YPN_1807 | protein | 353 | 69% helix, 0% strand | Q1CIP4 |
Pockets
5 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 522 | 0.74 | 0.82 | 42 | empty |
| 2 | 149 | 0.57 | 0.82 | 22 | empty |
| 3 | 91 | 0.35 | 0.74 | 18 | empty |
| 4 | 76 | 0.34 | 0.76 | 15 | empty |
| 5 | 53 | 0.28 | 0.74 | 12 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q1CIP4
- Elsewhere: UniProt Q1CIP4 · AlphaFold DB Q1CIP4
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