Research workbench

AlphaFold monomer V2.0 prediction for carbapenam-3-carboxylate synthase (Q9XB61)

Analyse AlphaFold monomer V2.0 prediction for carbapenam-3-carboxylate synthase (Q9XB61) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

Accession: Q9XB61
Type: protein
Length: 503 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0x3298b100681D3A2372Bba3b2f282750dD71629B9
Molecule: Carbapenam-3-carboxylate synthase
UniProt: Q9XB61
Pockets: 6 · best druggability 0.74

Structure

1 distinct chain · 42% helix, 21% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Carbapenam-3-carboxylate synthase	protein	503	42% helix, 21% strand	Q9XB61

Pockets

6 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	410	0.74	0.84	50	empty
2	199	0.63	0.83	37	empty
3	143	0.56	0.82	30	empty
4	65	0.34	0.76	15	empty
5	61	0.32	0.76	17	empty

Compared structures

1Q19 · Carbapenam Synthetase · an experimental structure of the same protein · chain A against C, TM-score 0.98
1Q19 · Carbapenam synthetase · an experimental structure of the same protein · chain A against C, TM-score 0.98
1Q15 · Carbapenam Synthetase · an experimental structure of the same protein · chain A against B, TM-score 0.96
1Q15 · Carbapenam synthetase · an experimental structure of the same protein · chain A against B, TM-score 0.96

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q9XB61
Elsewhere: UniProt Q9XB61 · AlphaFold DB Q9XB61

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