Research workbench
AlphaFold monomer V2.0 prediction for putative transport protein PC1_1686 (C6DEP2)
Analyse AlphaFold monomer V2.0 prediction for putative transport protein PC1_1686… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- C6DEP2
- Type
- protein
- Length
- 562 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x2760719Aaa7Aed839E71Ab4F25aCEafbAA8ceB27
- Molecule
- Putative transport protein PC1_1686
- UniProt
- C6DEP2
- Pockets
- 7 · best druggability 0.78
Structure
1 distinct chain · 64% helix, 12% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Putative transport protein PC1_1686 | protein | 562 | 64% helix, 12% strand | C6DEP2 |
Pockets
7 pockets found on a 1 Å grid, 5 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1110 | 0.78 | 0.80 | 91 | empty |
| 2 | 86 | 0.67 | 0.92 | 19 | empty |
| 3 | 182 | 0.58 | 0.81 | 26 | empty |
| 4 | 124 | 0.55 | 0.82 | 16 | empty |
| 5 | 158 | 0.51 | 0.79 | 26 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt C6DEP2
- Elsewhere: UniProt C6DEP2 · AlphaFold DB C6DEP2
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