Research workbench
AlphaFold monomer V2.0 prediction for UPF0398 protein SPY_1647/M5005_SPY1353 (Q99YL3)
Analyse AlphaFold monomer V2.0 prediction for UPF0398 protein SPY_1647/M5005_SPY1353… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q99YL3
- Type
- protein
- Length
- 171 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xE9F57a3d4309Bf38514229Fce9463e130999cA02
- Molecule
- UPF0398 protein SPY_1647/M5005_SPY1353
- UniProt
- Q99YL3
- Pockets
- 3 · best druggability 0.52
Structure
1 distinct chain · 42% helix, 21% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | UPF0398 protein SPY_1647/M5005_SPY1353 | protein | 171 | 42% helix, 21% strand | Q99YL3 |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 154 | 0.52 | 0.79 | 27 | empty |
| 2 | 52 | 0.33 | 0.78 | 13 | empty |
| 3 | 50 | 0.30 | 0.75 | 12 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q99YL3
- Elsewhere: UniProt Q99YL3 · AlphaFold DB Q99YL3
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