Research workbench
AlphaFold monomer V2.0 prediction for protein BMEI1586 (Q8YFD6)
Analyse AlphaFold monomer V2.0 prediction for protein BMEI1586 (Q8YFD6) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q8YFD6
- Type
- protein
- Length
- 342 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xfe84bF4795a94A8190E1860933597fFcB17c9846
- Molecule
- Protein BMEI1586
- UniProt
- Q8YFD6
- Pockets
- 2 · best druggability 0.47
Structure
1 distinct chain · 20% helix, 42% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Protein BMEI1586 | protein | 342 | 20% helix, 42% strand | Q8YFD6 |
Pockets
2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 118 | 0.47 | 0.79 | 17 | empty |
| 2 | 64 | 0.27 | 0.72 | 15 | empty |
Compared structures
- 1TM0 · Crystal Structure of the putative proline racemase from Brucella melitensis, Northeast… · an experimental structure of the same protein · chain A against A, TM-score 0.88
- 1TM0 · Crystal structure of the putative proline racemase from brucella melitensis, northeast… · an experimental structure of the same protein · chain A against A, TM-score 0.88
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8YFD6
- Elsewhere: UniProt Q8YFD6 · AlphaFold DB Q8YFD6
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