Research workbench
AlphaFold monomer V2.0 prediction for S-adenosyl-L-methionine-binding protein RPA0152 (Q6NDF6)
Analyse AlphaFold monomer V2.0 prediction for S-adenosyl-L-methionine-binding protein… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q6NDF6
- Type
- protein
- Length
- 167 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x203931C4dCE9665F4d5cF5934d3Ae3C09C32cf88
- Molecule
- S-adenosyl-L-methionine-binding protein RPA0152
- UniProt
- Q6NDF6
- Pockets
- 1 · best druggability 0.56
Structure
1 distinct chain · 8% helix, 29% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | S-adenosyl-L-methionine-binding protein RPA0152 | protein | 167 | 8% helix, 29% strand | Q6NDF6 |
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 287 | 0.56 | 0.77 | 33 | empty |
Compared structures
- 3OKX · Crystal structure of YaeB-like protein from Rhodopseudomonas palustris · an experimental structure of the same protein · chain A against A, TM-score 0.92
- 3OKX · Crystal structure of yaeb-like protein from rhodopseudomonas palustris · an experimental structure of the same protein · chain A against A, TM-score 0.92
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q6NDF6
- Elsewhere: UniProt Q6NDF6 · AlphaFold DB Q6NDF6
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