Research workbench
AlphaFold monomer V2.0 prediction for probable RNA polymerase sigma factor HI_1459 (P45215)
Analyse AlphaFold monomer V2.0 prediction for probable RNA polymerase sigma factor… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P45215
- Type
- protein
- Length
- 194 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x360B8dA9b6354DB9f5f9D83837B4234471f42C81
- Molecule
- Probable RNA polymerase sigma factor HI_1459
- UniProt
- P45215
- Pockets
- 4 · best druggability 0.62
Structure
1 distinct chain · 65% helix, 1% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Probable RNA polymerase sigma factor HI_1459 | protein | 194 | 65% helix, 1% strand | P45215 |
Pockets
4 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 205 | 0.62 | 0.82 | 17 | empty |
| 2 | 237 | 0.57 | 0.78 | 33 | empty |
| 3 | 123 | 0.42 | 0.76 | 14 | empty |
| 4 | 52 | 0.36 | 0.79 | 13 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P45215
- Elsewhere: UniProt P45215 · AlphaFold DB P45215
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