Research workbench
AlphaFold monomer V2.0 prediction for UPF0313 protein CPF_1407 (Q0TR88)
Analyse AlphaFold monomer V2.0 prediction for UPF0313 protein CPF_1407 (Q0TR88) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q0TR88
- Type
- protein
- Length
- 662 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x260D6D743e9CB293CAd7D5d61915104457dde2eD
- Molecule
- UPF0313 protein CPF_1407
- UniProt
- Q0TR88
- Pockets
- 9 · best druggability 0.78
Structure
1 distinct chain · 35% helix, 14% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | UPF0313 protein CPF_1407 | protein | 662 | 35% helix, 14% strand | Q0TR88 |
Pockets
9 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1045 | 0.78 | 0.80 | 79 | empty |
| 2 | 83 | 0.75 | 0.98 | 26 | empty |
| 3 | 52 | 0.39 | 0.81 | 15 | empty |
| 4 | 86 | 0.36 | 0.76 | 24 | empty |
| 5 | 90 | 0.35 | 0.74 | 17 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q0TR88
- Elsewhere: UniProt Q0TR88 · AlphaFold DB Q0TR88
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