Research workbench
AlphaFold monomer V2.0 prediction for nucleotide-binding protein RD1_1380 (Q16AH2)
Analyse AlphaFold monomer V2.0 prediction for nucleotide-binding protein RD1_1380… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q16AH2
- Type
- protein
- Length
- 295 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xb8D3B450AC50e83021eF2fc524AAC2745D922097
- Molecule
- Nucleotide-binding protein RD1_1380
- UniProt
- Q16AH2
- Pockets
- 4 · best druggability 0.57
Structure
1 distinct chain · 44% helix, 19% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Nucleotide-binding protein RD1_1380 | protein | 295 | 44% helix, 19% strand | Q16AH2 |
Pockets
4 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 216 | 0.57 | 0.79 | 23 | empty |
| 2 | 189 | 0.50 | 0.77 | 33 | empty |
| 3 | 158 | 0.47 | 0.77 | 23 | empty |
| 4 | 116 | 0.45 | 0.78 | 22 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q16AH2
- Elsewhere: UniProt Q16AH2 · AlphaFold DB Q16AH2
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.